Benchmarking atlas-level data integration in single-cell genomics MD Luecken, M Büttner, K Chaichoompu, A Danese, M Interlandi, ... Nature methods 19 (1), 41-50, 2022 | 822 | 2022 |
WASP: a Web-based Allele-Specific PCR assay designing tool for detecting SNPs and mutations P Wangkumhang, K Chaichoompu, C Ngamphiw, U Ruangrit, ... BMC genomics 8, 1-9, 2007 | 186 | 2007 |
EpiScanpy: integrated single-cell epigenomic analysis A Danese, ML Richter, K Chaichoompu, DS Fischer, FJ Theis, ... Nature Communications 12 (1), 5228, 2021 | 96 | 2021 |
Principals about principal components in statistical genetics F Abegaz, K Chaichoompu, E Génin, DW Fardo, IR König, ... Briefings in bioinformatics 20 (6), 2200-2216, 2019 | 51 | 2019 |
MT-ClustalW: multithreading multiple sequence alignment K Chaichoompu, S Kittitornkun, S Tongsima Proceedings 20th IEEE International Parallel & Distributed Processing
, 2006 | 51 | 2006 |
Iterative pruning PCA improves resolution of highly structured populations A Intarapanich, PJ Shaw, A Assawamakin, P Wangkumhang, ... BMC bioinformatics 10, 1-17, 2009 | 47 | 2009 |
Insight into the peopling of Mainland Southeast Asia from Thai population genetic structure P Wangkumhang, PJ Shaw, K Chaichoompu, C Ngamphiw, ... PLoS One 8 (11), e79522, 2013 | 33 | 2013 |
A different view on fine-scale population structure in Western African populations K Chaichoompu, F Abegaz, B Cavadas, V Fernandes, B Müller-Myhsok, ... Human Genetics 139 (1), 45-59, 2020 | 18 | 2020 |
IPCAPS: an R package for iterative pruning to capture population structure K Chaichoompu, F Abegaz, S Tongsima, PJ Shaw, A Sakuntabhai, ... Source code for biology and medicine 14, 1-5, 2019 | 16 | 2019 |
KRIS: keen and reliable interface subroutines for bioinformatic analysis K Chaichoompu, F Abegaz, S Tongsima, PJ Shaw, A Sakuntabhai, ... R package version 1 (1), 2018 | 11 | 2018 |
Speedup bioinformatics applications on multicore-based processor using vectorizing and multithreading strategies K Chaichoompu, S Kittitornkun, S Tongsima Bioinformation 2 (5), 182, 2007 | 5 | 2007 |
Benchmarking atlas-level data integration in single-cell genomics. biorxivorg 2020 M Luecken, M Büttner, K Chaichoompu, A Danese, M Interlandi, ... | 4 | |
Mahachie John JM, Van Steen K. 2019 F Abegaz, K Chaichoompu, E Genin, DW Fardo, IR Konig Principals about principal components in statistical genetics. Briefings in
, 2019 | 3 | 2019 |
A methodology for unsupervised clustering using iterative pruning to capture fine-scale structure K Chaichoompu, FA Yazew, S Tongsima, PJ Shaw, A Sakuntabhai, ... bioRxiv, 234989, 2017 | 2 | 2017 |
Human based genetic tools to refine genetic populations structure of honey bees (Apis mellifera ssp L.)(Hymenoptera: Apoidea: Apidae) colonies at regional scale G Noël, K Chaichoompu, G Leclercq, E Fabre, N Gengler, K Van Steen, ... EUROPEAN PhD NETWORK" INSECT SCIENCE" VIII Annual Meeting, 2017 | 1 | 2017 |
Fine-scale subpopulation detection via an SNP-based unsupervised method: A case study on the 1000 Genomes Project resources K Chaichoompu, A Wilantho, P Wangkumhang, S Tongsima, B Cavadas, ... PACIFIC SYMPOSIUM ON BIOCOMPUTING 2023: Kohala Coast, Hawaii, USA, 37
, 2022 | | 2022 |
Epistasis Detection for Human Complex Diseases in Structured Populations F Abegaz, K Chaichoompu, VS Kristel GENETIC EPIDEMIOLOGY 41 (7), 678-678, 2017 | | 2017 |
Capturing fine-scale population structure towards molecular reclassification of patients K Chaichoompu ULiège-Université de Liège, 2017 | | 2017 |
Epistasis detection for human complex diseases in structured populations K Van Steen, K Chaichoompu, F Abegaz Online poster abstracts, 1302-1302, 2017 | | 2017 |
Using IPCAPS to identify fine-scale population structure K Chaichoompu, Y Fentaw Abegaz, S Tongsima, PJ Shaw, ... The International Genetic Epidemiology Society 2017, 2017 | | 2017 |