| Improvements and impacts of GRCh38 human reference on high throughput sequencing data analysis Y Guo, Y Dai, H Yu, S Zhao, DC Samuels, Y Shyr Genomics 109 (2), 83-90, 2017 | 167 | 2017 |
| Gene2vec: distributed representation of genes based on co-expression J Du, P Jia, Y Dai, C Tao, Z Zhao, D Zhi BMC genomics 20, 7-15, 2019 | 153 | 2019 |
| Deep generative neural network for accurate drug response imputation P Jia, R Hu, G Pei, Y Dai, YY Wang, Z Zhao Nature communications 12 (1), 1740, 2021 | 54 | 2021 |
| A genome-wide association study discovers 46 loci of the human metabolome in the Hispanic Community Health Study/Study of Latinos EV Feofanova, H Chen, Y Dai, P Jia, ML Grove, AC Morrison, Q Qi, ... The American Journal of Human Genetics 107 (5), 849-863, 2020 | 50 | 2020 |
| Age-associated telomere attrition in adipocyte progenitors predisposes to metabolic disease Z Gao, AC Daquinag, C Fussell, Z Zhao, Y Dai, A Rivera, BE Snyder, ... Nature metabolism 2 (12), 1482-1497, 2020 | 45 | 2020 |
| deTS: tissue-specific enrichment analysis to decode tissue specificity G Pei, Y Dai, Z Zhao, P Jia Bioinformatics 35 (19), 3842-3845, 2019 | 43 | 2019 |
| Association of CXCR6 with COVID-19 severity: delineating the host genetic factors in transcriptomic regulation Y Dai, J Wang, HH Jeong, W Chen, P Jia, Z Zhao Human genetics 140 (9), 1313-1328, 2021 | 39 | 2021 |
| Genome-wide correlation of DNA methylation and gene expression in postmortem brain tissues of opioid use disorder patients A Liu, Y Dai, EF Mendez, R Hu, GR Fries, KE Najera, S Jiang, TD Meyer, ... International Journal of Neuropsychopharmacology 24 (11), 879-891, 2021 | 30 | 2021 |
| TSEA-DB: a trait–tissue association map for human complex traits and diseases P Jia, Y Dai, R Hu, G Pei, AM Manuel, Z Zhao Nucleic acids research 48 (D1), D1022-D1030, 2020 | 29 | 2020 |
| Hyperlipidemia-associated gene variations and expression patterns revealed by whole-genome and transcriptome sequencing of rabbit models Z Wang, J Zhang, H Li, J Li, M Niimi, G Ding, H Chen, J Xu, H Zhang, Z Xu, ... Scientific reports 6 (1), 26942, 2016 | 29 | 2016 |
| WebCSEA: web-based cell-type-specific enrichment analysis of genes Y Dai, R Hu, A Liu, KS Cho, AM Manuel, X Li, X Dong, P Jia, Z Zhao Nucleic acids research 50 (W1), W782-W790, 2022 | 28 | 2022 |
| T cell exhaustion is associated with antigen abundance and promotes transplant acceptance D Zou, Y Dai, X Zhang, G Wang, X Xiao, P Jia, XC Li, Z Guo, W Chen American journal of transplantation 20 (9), 2540-2550, 2020 | 27 | 2020 |
| A convergent study of genetic variants associated with Crohn’s disease: evidence from GWAS, gene expression, methylation, eQTL and TWAS Y Dai, G Pei, Z Zhao, P Jia Frontiers in genetics 10, 444911, 2019 | 27 | 2019 |
| Investigation of multi-trait associations using pathway-based analysis of GWAS summary statistics G Pei, H Sun, Y Dai, X Liu, Z Zhao, P Jia BMC genomics 20, 43-54, 2019 | 21 | 2019 |
| Progression of prostate carcinoma is promoted by adipose stromal cell-secreted CXCL12 signaling in prostate epithelium F Su, AC Daquinag, S Ahn, A Saha, Y Dai, Z Zhao, J DiGiovanni, ... NPJ Precision Oncology 5 (1), 26, 2021 | 19 | 2021 |
| CSEA-DB: an omnibus for human complex trait and cell type associations Y Dai, R Hu, AM Manuel, A Liu, P Jia, Z Zhao Nucleic Acids Research 49 (D1), D862-D870, 2021 | 19 | 2021 |
| An integrative, genomic, transcriptomic and network-assisted study to identify genes associated with human cleft lip with or without cleft palate F Yan, Y Dai, J Iwata, Z Zhao, P Jia BMC Medical Genomics 13, 1-13, 2020 | 19 | 2020 |
| Charting the proteome landscape in major psychiatric disorders: from biomarkers to biological pathways towards drug discovery BS Fernandes, Y Dai, P Jia, Z Zhao European Neuropsychopharmacology 61, 43-59, 2022 | 17 | 2022 |
| Predicting regulatory variants using a dense epigenomic mapped CNN model elucidated the molecular basis of trait-tissue associations G Pei, R Hu, Y Dai, AM Manuel, Z Zhao, P Jia Nucleic acids research 49 (1), 53-66, 2021 | 16 | 2021 |
| deCS: A Tool for Systematic Cell Type Annotations of Single-Cell RNA Sequencing Data Among Human Tissues G Pei, F Yan, LM Simon, Y Dai, P Jia, Z Zhao Genomics, Proteomics & Bioinformatics 21 (2), 370-384, 2023 | 15 | 2023 |
