| A multiple alignment algorithm for metabolic pathway analysis using enzyme hierarchy. Y Tohsato, H Matsuda, A Hashimoto ISMB 8, 376-383, 2000 | 138 | 2000 |
| SSBD: a database of quantitative data of spatiotemporal dynamics of biological phenomena Y Tohsato, KHL Ho, K Kyoda, S Onami Bioinformatics 32 (22), 3471-3479, 2016 | 46 | 2016 |
| Parameter optimization and sensitivity analysis for large kinetic models using a real-coded genetic algorithm Y Tohsato, K Ikuta, A Shionoya, Y Mazaki, M Ito Gene 518 (1), 84-90, 2013 | 41 | 2013 |
| GenoBase: comprehensive resource database of Escherichia coli K-12 Y Otsuka, A Muto, R Takeuchi, C Okada, M Ishikawa, K Nakamura, ... Nucleic acids research 43 (D1), D606-D617, 2015 | 40 | 2015 |
| ECOH: an enzyme commission number predictor using mutual information and a support vector machine Y Matsuta, M Ito, Y Tohsato Bioinformatics 29 (3), 365-372, 2013 | 40 | 2013 |
| Metabolic pathway alignment based on similarity between chemical structures Y Tohsato, Y Nishimura Information and Media Technologies 3 (1), 191-200, 2008 | 30 | 2008 |
| Phenotype profiling of single gene deletion mutants of E. coli using Biolog technology Y Tohsato, H Mori Genome informatics 21, 42-52, 2008 | 23 | 2008 |
| Heterogeneous database federation using grid technology for drug discovery process Y Tohsato, T Kosaka, S Date, S Shimojo, H Matsuda Grid Computing in Life Science: First International Workshop on Life Science …, 2005 | 20 | 2005 |
| Biochemical studies on sphingolipids of Artemia franciscana: complex neutral glycosphingolipids H Kojima, Y Tohsato, K Kabayama, S Itonori, M Ito Glycoconjugate Journal 30, 257-268, 2013 | 18 | 2013 |
| Intrinsically disordered proteins in human mitochondria M Ito, Y Tohsato, H Sugisawa, S Kohara, S Fukuchi, I Nishikawa, ... Genes to Cells 17 (10), 817-825, 2012 | 14 | 2012 |
| An OGSA-based integration of life-scientific resources for drug discovery T Kosaka, Y Tohsato, S Date, H Matsuda, S Shimojo Methods of Information in Medicine 44 (02), 257-261, 2005 | 14 | 2005 |
| Biological Dynamics Markup Language (BDML): an open format for representing quantitative biological dynamics data K Kyoda, Y Tohsato, KHL Ho, S Onami Bioinformatics 31 (7), 1044-1052, 2015 | 13 | 2015 |
| ENVIRONMENTAL DEPENDENCY OF GENE KNOCKOUTS ON PHENOTYPE MICROARRAY ANALYSIS IN ESCHERICHIA COLI Y Tohsato, T Baba, Y Mazaki, M Ito, BL Wanner, H Mori Journal of Bioinformatics and Computational Biology 8 (supp01), 83-99, 2010 | 12 | 2010 |
| A method for species comparison of metabolic networks using reaction profile Y Tohsato IPSJ Digital Courier 2, 685-690, 2006 | 9 | 2006 |
| Reaction similarities focusing substructure changes of chemical compounds and metabolic pathway alignments Y Tohsato, Y Nishimura Information and Media Technologies 4 (2), 390-399, 2009 | 8 | 2009 |
| Investigation of glycan evolution based on a comprehensive analysis of glycosyltransferases using phylogenetic profiling T Tomono, H Kojima, S Fukuchi, Y Tohsato, M Ito Biophysics and physicobiology 12, 57-68, 2015 | 7 | 2015 |
| NeuroGT: A brain atlas of neurogenic tagging CreER drivers for birthdate-based classification and manipulation of mouse neurons T Hirata, Y Tohsato, H Itoga, G Shioi, H Kiyonari, S Oka, T Fujimori, ... Cell Reports Methods 1 (3), 2021 | 6 | 2021 |
| Comparative proteomic analysis reveals differentially expressed proteins in Caenorhabditis elegans pgl-1 mutants grown at 20 C and 25 C Y Tohsato, K Monobe, K Suzuki, T Hayano, I Kawasaki, M Ito Journal of proteomics 75 (15), 4792-4801, 2012 | 6 | 2012 |
| An application of a pathway alignment method to the analysis of metabolic pathways Y Tohsato Research Communications in Biochemistry, Cell and Molecular Biology 5, 179-191, 2003 | 6 | 2003 |
| BD5: An open HDF5-based data format to represent quantitative biological dynamics data K Kyoda, KHL Ho, Y Tohsato, H Itoga, S Onami Plos one 15 (8), e0237468, 2020 | 4 | 2020 |
