Test case prioritization of build acceptance tests for an enterprise cloud application: An industrial case study H Srikanth, M Cashman, MB Cohen Journal of Systems and Software 119, 122-135, 2016 | 44 | 2016 |
Navigating the maze: the impact of configurability in bioinformatics software M Cashman, MB Cohen, P Ranjan, RW Cottingham Proceedings of the 33rd ACM/IEEE International Conference on Automated …, 2018 | 34 | 2018 |
Metabolic feedback inhibition influences metabolite secretion by the human gut symbiont Bacteroides thetaiotaomicron JL Catlett, J Catazaro, M Cashman, S Carr, R Powers, MB Cohen, ... Msystems 5 (5), 10.1128/msystems. 00252-20, 2020 | 19 | 2020 |
Reusability first: Toward FAIR workflows M Wolf, J Logan, K Mehta, D Jacobson, M Cashman, AM Walker, ... 2021 IEEE International Conference on Cluster Computing (CLUSTER), 444-455, 2021 | 15 | 2021 |
End-to-end molecular communication channels in cell metabolism: an information theoretic study Z Sakkaff, JL Catlett, M Cashman, M Pierobon, NR Buan, MB Cohen, ... Proceedings of the 4th ACM International Conference on Nanoscale Computing …, 2017 | 15 | 2017 |
Using a genetic algorithm to optimize configurations in a data-driven application U Sinha, M Cashman, MB Cohen Search-Based Software Engineering: 12th International Symposium, SSBSE 2020 …, 2020 | 13 | 2020 |
Metabolic Synergy between Human Symbionts Bacteroides and Methanobrevibacter JL Catlett, S Carr, M Cashman, MD Smith, M Walter, Z Sakkaff, C Kelley, ... Microbiology spectrum 10 (3), e01067-22, 2022 | 12 | 2022 |
Spatial graph attention and curiosity-driven policy for antiviral drug discovery Y Wu, M Cashman, N Choma, ÉT Prates, VGM Vergara, M Shah, A Chen, ... The International Conference on Learning Representations (ICLR), 2022 | 11 | 2022 |
Climatic clustering and longitudinal analysis with impacts on food, bioenergy, and pandemics J Lagergren, M Cashman, VGM Vergara, PR Eller, JGFM Gazolla, ... Phytobiomes Journal 7 (1), 65-77, 2023 | 9 | 2023 |
BioSIMP: using software testing techniques for sampling and inference in biological organisms M Cashman, JL Catlett, MB Cohen, NR Buan, Z Sakkaff, M Pierobon, ... 2017 IEEE/ACM 12th International Workshop on Software Engineering for …, 2017 | 6 | 2017 |
DNA as features: organic software product lines M Cashman, J Firestone, MB Cohen, T Thianniwet, W Niu Proceedings of the 23rd International Systems and Software Product Line …, 2019 | 4 | 2019 |
An empirical investigation of organic software product lines M Cashman, J Firestone, MB Cohen, T Thianniwet, W Niu Empirical Software Engineering 26 (3), 44, 2021 | 3 | 2021 |
Genetics of varicose veins reveals polygenic architecture and genetic overlap with arterial and venous disease MG Levin, JE Huffman, A Verma, KA Sullivan, AA Rodriguez, D Kainer, ... Nature Cardiovascular Research 2 (1), 44-57, 2023 | 2 | 2023 |
Exploring the role of plant lysin motif receptor-like kinases in regulating plant-microbe interactions in the bioenergy crop Populus KR Cope, ET Prates, JI Miller, ONA Demerdash, M Shah, D Kainer, A Cliff, ... Computational and Structural Biotechnology Journal 21, 1122-1139, 2023 | 2 | 2023 |
Digging deeper into GWAS signal using GRIN implicates additional genes contributing to suicidal behavior KA Sullivan, M Lane, M Cashman, JI Miller, M Pavicic, AM Walker, A Cliff, ... medRxiv, 2022.04. 20.22273895, 2022 | 2 | 2022 |
A Molecular Communication model for cellular metabolism Z Sakkaff, AP Freiburger, JL Catlett, M Cashman, A Immaneni, NR Buan, ... bioRxiv, 2023.06. 28.546976, 2023 | 1 | 2023 |
dkainer/RWRtoolkit D Kainer, M Lane, K Sullivan, M Cashman, JI Miller Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States), 2022 | 1 | 2022 |
Supporting data for climatic clustering and longitudinal analysis with impacts on food, bioenergy, and pandemics J Lagergren, M Cashman, V Melesse Vergara, P Eller, J Gazolla, ... Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States). Oak Ridge …, 2021 | 1 | 2021 |
Multi-omic network analysis identifies dysregulated neurobiological pathways in opioid addiction KA Sullivan, D Kainer, M Lane, M Cashman, JI Miller, MR Garvin, ... medRxiv, 2024.01. 04.24300831, 2024 | | 2024 |
78. NETWORK BIOLOGY ALGORITHMS IDENTIFY BIOLOGICAL PATHWAYS UNDERLYING CIGARETTE SMOKING BEHAVIORS K Sullivan, JI Miller, D Kainer, M Lane, M Cashman, MR Garvin, ... European Neuropsychopharmacology 75, S98-S99, 2023 | | 2023 |